CyQUANT® Direct Cell Proliferation AssayMetabolic activity is influenced by factors other than treatment, which can include cell type, confluence, media conditions and additives, temperature, and passage number. Compounds may also interfere with the enzymes that generate the metabolically based readout. For these reasons, a metabolic-based assay may not be ideal for some studies of cytotoxicity and proliferation. Improving upon the CyQUANT® family of cell proliferation assays, we have developed the CyQUANT® Direct Cell Proliferation Assay, with these benefits:

  • More convenient workflow ideal for high-throughput screening—no washes, cell lysis, or temperature equilibrations required
  • Measures independent of metabolic state of cells reducing risk for false positives
  • Assess cell growth, cell viability, or compound toxicity in a range of applications

CyQUANT® Direct Cell Proliferation Assay—an ideal assay for high-throughput screening

The CyQUANT® Direct Cell Proliferation Assay kit consists of two components: a green fluorescent nucleic acid stain and a background suppression dye. Both components can be stored at room temperature for quick and convenient use. The nucleic acid dye is a live cell-permeable reagent that mainly concentrates in the nucleus of mammalian cells. The suppression dye is impermeable in live cells and suppresses “green” fluorescence, eliminating the need to perform wash steps (Figure 1). The combination of these two components results in an assay based on both DNA content and membrane integrity.

CyQUANT® Direct Cell Proliferation Assay   Figure 1. CyQUANT® Direct assay protocol. The CyQUANT® Direct assay is a homogenous, lysis-free cell proliferation and cytotoxicity assay designed for use with multi-well plates (96, 384, or 1,536 plate formats), making it ideal for high-throughput screening applications. The reagent is added directly to cells in complete medium, incubated for 30 to 60 min and read on standard plate readers.

With a dynamic range from less than 40 to more than 20,000 cells (approximately) depending on cell type and format, the CyQUANT® Direct assay can be used in either 96, 384, or 1,536-well microplate formats and is compatible with most HTS and HCS readers (Figure 2).

The fluorescence intensity plateaus within 30 to 60 minutes after reagent addition and the signal remains stable for more than 7 hours offering workflow convenience and robustness in projects with large sample numbers (Figure 3)

CyQUANT® Direct Cell Proliferation Assay

Figure 2. Linearity of CyQUANT® Direct assay signal. CHO cells were plated at densities of 0–20,000 per well in a 384-well microplate. Cells were labeled with CyQUANT® Direct according to the microtiter plate assay format protocol. Fluorescence intensities, measured with a fluorescence microplate reader using FITC filter set, varied linearly with respect to cell number of the range of approximately 40 to 20,000 cells. The inset shows the measurement range from 0–1,250 cells per well. The results shown represent averages of eight experiments per data point.
CyQUANT® Direct Cell Proliferation Assay

Figure 3. Stability of CyQUANT® Direct assay signal. CyQUANT® Direct 2x detection reagent was added to adherent CHO cells in serum-containing medium, and fluorescence was read from 5 minutes to 7.5 hours after reagent addition. Fluorescence signal intensity reached a plateau within 30–60 minutes of reagent addition, and remained stable for more than 7 hours. 

The CyQUANT® Direct assay is based on a cell-permeant DNA-binding dye in combination with a background suppression reagent. As DNA content is highly regulated, cell number estimates are very accurate. The masking dye blocks staining of dead cells and cells with compromised cell membranes, causing only healthy cells to be stained. Therefore, the CyQUANT® Direct assay measures proliferation as well as cytotoxicity. The concordance of the CyQUANT® Direct assay with cytotoxicity assays based on cell metabolism or energy states is excellent (Figure 4). Moreover, recent studies using diverse sets of cytotoxic compounds and assay types have shown that cell number (proliferation) is among the most sensitive indicators of cytotoxicity.

Figure 4. Cytotoxicity measurements using the CyQUANT® Direct assay. Measurements of cytotoxicity differences across different cell types were performed using the CyQUANT® Direct assay. Hep-G2, Jurkat, human aortic smooth muscle cells (HASMC), and human pulmonary aortic smooth muscle cells (HPASMC) were seeded in 384-well plates at a density of 5,000 cells per well with 30 µL medium containing 10% FBS. Following incubation at 37°C for 48 hours with increasing concentrations of Tamoxifen, 30 µL of CyQUANT® Direct reagent was added into each well. Fluorescence measurements were made after 60 minutes. Fluorescence intensities were normalized to DMSO alone treatment, and IC50 curves were generated. The results shown represent averages of readings from eight wells per data point. As shown in the figure, the two primary cell types (HASMC and HPASMC) were significantly more sensitive to Tamoxifen than two transformed cell lines, adherent Hep-G2, and suspension Jurkat cells.

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Ordering information

Catalog # Name Size List Price (USD) Qty
C35011 CyQUANT® Direct Cell Proliferation Assay 10 microplates 320.12
C35012 CyQUANT® Direct Cell Proliferation Assay 100 microplates 2,235.54